Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09120

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
2,062,212	+		BPHYT_RS09115	0.34	-0.4
2,062,213	-		BPHYT_RS09115	0.34	-1.3
2,062,346	-		BPHYT_RS09115	0.46	-0.0
2,062,714	+		BPHYT_RS09115	0.80	-0.8
2,063,200	-		BPHYT_RS09120	0.34	-0.6
2,063,200	-		BPHYT_RS09120	0.34	+1.2
2,063,217	+		BPHYT_RS09120	0.37	-1.5
2,063,275	-		BPHYT_RS09120	0.44	-0.3
2,063,305	-		BPHYT_RS09120	0.48	+1.0
2,063,355	+		BPHYT_RS09120	0.54	-1.1
2,063,355	+		BPHYT_RS09120	0.54	+0.8
2,063,355	+		BPHYT_RS09120	0.54	+1.1
2,063,538	+		BPHYT_RS09120	0.78	+1.3
2,063,538	+		BPHYT_RS09120	0.78	+0.7
2,063,561	+		BPHYT_RS09120	0.81	-1.5
2,063,561	+		BPHYT_RS09120	0.81	-2.1
2,063,561	+		BPHYT_RS09120	0.81	-0.5
2,063,561	+		BPHYT_RS09120	0.81	+0.6
2,063,561	+		BPHYT_RS09120	0.81	+1.5
2,063,562	-		BPHYT_RS09120	0.81	+0.1
2,063,566	-		BPHYT_RS09120	0.82	+0.3
2,063,566	-		BPHYT_RS09120	0.82	+1.3
2,063,566	-		BPHYT_RS09120	0.82	-1.5
2,063,575	-		BPHYT_RS09120	0.83	+0.3
2,063,620	-		BPHYT_RS09120	0.89	+1.0
2,063,707	-				-1.0
2,064,102	-		BPHYT_RS09125	0.12	+0.5
2,064,102	-		BPHYT_RS09125	0.12	+1.3
2,064,142	-		BPHYT_RS09125	0.15	+0.4
2,064,155	+		BPHYT_RS09125	0.16	+0.4
2,064,234	+		BPHYT_RS09125	0.21	-0.1
2,064,234	+		BPHYT_RS09125	0.21	+3.5
2,064,234	+		BPHYT_RS09125	0.21	+0.3
2,064,235	-		BPHYT_RS09125	0.21	+1.2
2,064,471	+		BPHYT_RS09125	0.38	+1.5
2,064,471	+		BPHYT_RS09125	0.38	-0.6
2,064,472	-		BPHYT_RS09125	0.38	-0.3
2,064,551	+		BPHYT_RS09125	0.44	-0.9
2,064,552	-		BPHYT_RS09125	0.44	-1.2
2,064,552	-		BPHYT_RS09125	0.44	-0.4