Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08705

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
1,975,780	+		BPHYT_RS08700	0.17	-0.6
1,975,781	-		BPHYT_RS08700	0.17	-1.0
1,975,781	-		BPHYT_RS08700	0.17	-2.5
1,975,867	+		BPHYT_RS08700	0.25	+0.8
1,975,867	+		BPHYT_RS08700	0.25	+1.1
1,976,036	-		BPHYT_RS08700	0.42	+1.5
1,976,170	+		BPHYT_RS08700	0.55	-0.3
1,976,171	-		BPHYT_RS08700	0.56	+0.1
1,976,347	+		BPHYT_RS08700	0.73	+0.7
1,976,412	+		BPHYT_RS08700	0.80	+1.0
1,976,412	+		BPHYT_RS08700	0.80	-1.0
1,976,532	+				-0.3
1,976,685	-				-0.3
1,976,953	+		BPHYT_RS08705	0.63	-0.5
1,976,953	+		BPHYT_RS08705	0.63	+0.5
1,976,954	-		BPHYT_RS08705	0.64	-0.0
1,976,980	+		BPHYT_RS08705	0.72	-2.4
1,977,011	-		BPHYT_RS08705	0.82	-1.7
1,977,047	-				-1.3
1,977,059	-				-1.3
1,977,064	+				-0.4
1,977,065	-				+0.1
1,977,070	+				-1.6
1,977,314	+				+0.9
1,977,314	+				-1.2
1,977,314	+				+0.7
1,977,373	-				+1.5
1,977,392	-				+0.0
1,977,483	-				+0.4
1,977,483	-				+2.3
1,977,937	-		BPHYT_RS08710	0.28	-1.3