Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08305

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
1,899,043	+		BPHYT_RS08300	0.61	+2.3
1,899,082	+		BPHYT_RS08300	0.64	-0.3
1,899,083	-		BPHYT_RS08300	0.64	+0.5
1,899,083	-		BPHYT_RS08300	0.64	+0.6
1,899,611	-				+1.3
1,899,910	+				-1.5
1,899,922	+				+0.2
1,900,008	+		BPHYT_RS08305	0.22	+1.2
1,900,008	+		BPHYT_RS08305	0.22	-0.4
1,900,008	+		BPHYT_RS08305	0.22	+1.9
1,900,212	+		BPHYT_RS08305	0.76	+1.4
1,900,212	+		BPHYT_RS08305	0.76	-0.5
1,900,225	+		BPHYT_RS08305	0.79	-1.0
1,900,300	-				-0.7
1,900,861	-				+1.1
1,900,861	-				+0.2
1,900,938	-				-2.0
1,901,002	-				-0.9
1,901,022	+				-0.9
1,901,076	+				-1.3
1,901,076	+				+0.6
1,901,196	-		BPHYT_RS08315	0.11	-0.7
1,901,196	-		BPHYT_RS08315	0.11	-0.5
1,901,201	+		BPHYT_RS08315	0.12	+1.4
1,901,202	-		BPHYT_RS08315	0.12	-1.2