Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06950

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
1,571,641	+				-0.2
1,571,764	-		BPHYT_RS06945	0.14	-0.0
1,571,900	+		BPHYT_RS06945	0.30	+0.0
1,571,900	+		BPHYT_RS06945	0.30	-0.1
1,571,901	-		BPHYT_RS06945	0.30	-0.6
1,571,901	-		BPHYT_RS06945	0.30	-1.0
1,572,144	+		BPHYT_RS06945	0.57	-2.1
1,572,144	+		BPHYT_RS06945	0.57	+1.0
1,572,145	-		BPHYT_RS06945	0.57	-0.9
1,572,145	-		BPHYT_RS06945	0.57	+1.0
1,572,145	-		BPHYT_RS06945	0.57	+1.3
1,572,145	-		BPHYT_RS06945	0.57	-0.8
1,572,151	-		BPHYT_RS06945	0.58	+0.5
1,572,307	+		BPHYT_RS06945	0.76	-0.5
1,572,307	+		BPHYT_RS06945	0.76	-0.1
1,572,307	+		BPHYT_RS06945	0.76	-0.2
1,572,308	-		BPHYT_RS06945	0.76	+0.7
1,572,420	+		BPHYT_RS06945	0.89	+1.0
1,572,570	-				-0.0
1,572,573	-				+0.5
1,572,574	+				-0.1
1,572,575	-				+1.3
1,572,626	+				-0.3
1,572,677	+				+0.7
1,572,848	+		BPHYT_RS06950	0.21	-1.0
1,573,259	+		BPHYT_RS06950	0.62	-1.3
1,573,391	+		BPHYT_RS06950	0.76	+0.1
1,573,391	+		BPHYT_RS06950	0.76	-1.5
1,573,463	+		BPHYT_RS06950	0.83	-1.5
1,573,520	+		BPHYT_RS06950	0.89	-1.5
1,573,556	+				-0.9
1,573,556	+				+1.3
1,573,557	-				+0.6
1,573,613	+				-0.6
1,573,613	+				-0.8
1,573,614	-				+0.4
1,573,629	-				-0.8
1,573,638	+				+0.2
1,573,659	+				-1.4
1,573,666	+				-0.9
1,573,667	-				-0.8
1,573,686	+				-0.5
1,573,686	+				+0.2
1,573,731	+				-1.3
1,573,761	-				+0.3
1,573,798	+				-1.1
1,573,858	-				+0.2
1,573,858	-				+1.3
1,573,948	+				-0.3
1,573,949	-				-0.2
1,573,974	+				-1.0