Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05695

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
1,298,284	+				-0.1
1,298,284	+				-2.0
1,298,285	-				+1.1
1,298,285	-				-1.3
1,298,294	+				-1.4
1,298,298	+				+2.7
1,298,298	+				+0.8
1,298,299	-				+0.2
1,298,299	-				-1.6
1,298,424	+		BPHYT_RS05690	0.26	-1.1
1,298,743	+				+1.0
1,298,941	-				-1.7
1,299,029	+				-0.8
1,299,177	+				-0.0
1,299,178	-				-0.6
1,299,259	+				-1.4
1,299,361	+		BPHYT_RS05695	0.13	-0.4
1,299,866	+		BPHYT_RS05695	0.69	+0.5
1,299,867	-		BPHYT_RS05695	0.70	+1.3
1,299,872	+		BPHYT_RS05695	0.70	-0.4
1,299,902	-		BPHYT_RS05695	0.74	-1.1
1,299,932	+		BPHYT_RS05695	0.77	+2.2
1,300,194	+		BPHYT_RS05700	0.21	+0.8
1,300,195	-		BPHYT_RS05700	0.22	+1.7
1,300,360	+		BPHYT_RS05700	0.74	+0.9
1,300,360	+		BPHYT_RS05700	0.74	-0.2
1,300,623	-		BPHYT_RS05705	0.78	+0.7
1,300,732	+		BPHYT_RS05710	0.17	+0.5
1,300,851	+		BPHYT_RS05710	0.51	+0.4
1,300,852	-		BPHYT_RS05710	0.51	-1.6
1,300,852	-		BPHYT_RS05710	0.51	+2.1
1,300,852	-		BPHYT_RS05710	0.51	+0.6
1,300,862	+		BPHYT_RS05710	0.54	+0.4
1,300,896	+		BPHYT_RS05710	0.64	-1.0
1,300,896	+		BPHYT_RS05710	0.64	+0.2
1,300,985	-		BPHYT_RS05710	0.90	-0.3