Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04625

Experiment: 36hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO2 MOI 1
1,070,094	-		BPHYT_RS04620	0.32	+1.4
1,070,199	-		BPHYT_RS04620	0.47	-2.0
1,070,224	+		BPHYT_RS04620	0.50	-0.2
1,070,225	-		BPHYT_RS04620	0.51	+0.5
1,070,225	-		BPHYT_RS04620	0.51	+0.2
1,070,329	+		BPHYT_RS04620	0.66	+0.8
1,070,330	-		BPHYT_RS04620	0.66	-1.0
1,070,445	-		BPHYT_RS04620	0.82	-0.4
1,070,540	-				-0.4
1,070,540	-				-0.1
1,070,562	+				-0.7
1,070,562	+				-0.9
1,070,614	-				-1.3
1,071,163	-		BPHYT_RS04625	0.65	-0.5
1,071,331	-		BPHYT_RS04625	0.84	+0.1
1,071,569	+				+0.3
1,071,737	+		BPHYT_RS04630	0.23	-2.1
1,071,810	-		BPHYT_RS04630	0.29	-0.7
1,072,286	+		BPHYT_RS04630	0.69	-2.4