Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33795

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,171,520	+		BPHYT_RS33790	0.53	-1.0
3,171,523	+		BPHYT_RS33790	0.54	+0.1
3,171,523	+		BPHYT_RS33790	0.54	-0.1
3,171,524	-		BPHYT_RS33790	0.54	+0.2
3,171,533	-		BPHYT_RS33790	0.54	-0.3
3,171,811	+		BPHYT_RS33790	0.68	-0.2
3,171,847	+		BPHYT_RS33790	0.70	-0.9
3,172,107	+		BPHYT_RS33790	0.84	+0.0
3,172,324	+				-0.2
3,172,807	+		BPHYT_RS33795	0.18	-0.5
3,172,854	+		BPHYT_RS33795	0.20	-0.4
3,172,856	+		BPHYT_RS33795	0.20	-0.4
3,174,490	+				-0.9
3,174,490	+				+0.4
3,174,491	-				+1.1
3,174,699	-				+1.4
3,174,728	+				-2.2
3,174,728	+				-0.3
3,174,774	-				-0.4
3,174,788	+				+0.8
3,174,788	+				+0.3
3,174,789	-				-1.0
3,174,789	-				-0.8
3,174,789	-				+0.8
3,175,030	+		BPHYT_RS33800	0.14	+1.1
3,175,109	+		BPHYT_RS33800	0.17	+0.7
3,175,110	-		BPHYT_RS33800	0.17	-0.6
3,175,154	+		BPHYT_RS33800	0.19	+0.2
3,175,328	+		BPHYT_RS33800	0.25	-0.0
3,175,449	+		BPHYT_RS33800	0.29	-0.1
3,175,449	+		BPHYT_RS33800	0.29	+0.1
3,175,449	+		BPHYT_RS33800	0.29	-0.0
3,175,449	+		BPHYT_RS33800	0.29	-0.8
3,175,450	-		BPHYT_RS33800	0.29	-0.1
3,175,453	+		BPHYT_RS33800	0.29	-0.1
3,175,454	-		BPHYT_RS33800	0.29	+0.3
3,175,589	+		BPHYT_RS33800	0.34	-0.5