Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28600

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
1,968,306	-				+1.7
1,968,364	+				-0.3
1,968,477	-		BPHYT_RS28590	0.15	-1.4
1,968,810	+				+1.6
1,969,108	-		BPHYT_RS28595	0.72	+0.0
1,969,127	+		BPHYT_RS28595	0.76	+1.1
1,969,276	+				+0.2
1,969,277	-				-0.1
1,969,446	-		BPHYT_RS28600	0.37	-1.8
1,969,755	+				+0.2
1,970,023	-				+0.5
1,970,154	-		BPHYT_RS28605	0.16	-0.7
1,970,632	-		BPHYT_RS28605	0.82	+1.0