Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24470

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
1,059,060	+				+0.4
1,059,061	-				-1.9
1,059,117	+				+0.6
1,059,191	-				+0.4
1,059,273	+				-0.9
1,059,426	+				-1.2
1,059,726	+		BPHYT_RS24470	0.32	-1.2
1,059,945	-		BPHYT_RS24470	0.53	+0.2
1,060,055	+		BPHYT_RS24470	0.64	+0.6
1,060,056	-		BPHYT_RS24470	0.64	+0.0
1,060,056	-		BPHYT_RS24470	0.64	-0.7
1,060,056	-		BPHYT_RS24470	0.64	+1.2
1,060,092	-		BPHYT_RS24470	0.67	+0.4
1,060,119	-		BPHYT_RS24470	0.70	-0.2
1,060,258	+		BPHYT_RS24470	0.83	-1.1
1,060,424	+				-0.4
1,060,424	+				+0.3
1,060,425	-				-0.4
1,060,626	+				-1.5
1,060,701	-				-0.5
1,060,987	+		BPHYT_RS24475	0.24	+0.1
1,061,002	+		BPHYT_RS24475	0.25	+0.5
1,061,002	+		BPHYT_RS24475	0.25	+0.2
1,061,265	-		BPHYT_RS24475	0.53	-1.2