Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16095

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,651,150	-		BPHYT_RS16085	0.49	+1.7
3,651,150	-		BPHYT_RS16085	0.49	+0.9
3,651,361	+		BPHYT_RS16085	0.72	-0.8
3,651,656	-				-2.6
3,651,766	+		BPHYT_RS16090	0.38	-0.1
3,651,767	-		BPHYT_RS16090	0.38	+0.9
3,651,941	-				-0.2
3,652,034	+				+0.4
3,652,116	-				-0.8
3,652,116	-				-0.3
3,652,116	-				+0.8
3,652,183	+		BPHYT_RS16095	0.16	-0.4
3,652,553	-		BPHYT_RS16095	0.49	-0.9
3,652,840	+		BPHYT_RS16095	0.75	+0.1
3,652,859	-		BPHYT_RS16095	0.77	-2.4
3,652,994	+		BPHYT_RS16095	0.89	-0.8
3,653,080	+				+0.6
3,653,106	+				-0.2
3,653,132	+				+1.1
3,653,132	+				-0.9
3,653,132	+				-0.1
3,653,133	-				-0.2
3,653,133	-				-0.3
3,653,133	-				-0.6
3,653,138	+				-0.5
3,653,138	+				-1.5
3,653,138	+				-2.3
3,653,157	-				-0.4
3,653,195	+				+0.2
3,653,248	+				-0.0