Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14150

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,230,269	+		BPHYT_RS14145	0.64	-0.2
3,230,269	+		BPHYT_RS14145	0.64	+0.8
3,230,269	+				-0.1
3,230,269	+		BPHYT_RS14145	0.64	+0.5
3,230,270	-		BPHYT_RS14145	0.64	+0.8
3,230,270	-		BPHYT_RS14145	0.64	+2.1
3,230,270	-		BPHYT_RS14145	0.64	+0.6
3,230,270	-		BPHYT_RS14145	0.64	+1.5
3,230,270	-		BPHYT_RS14145	0.64	+1.3
3,230,270	-		BPHYT_RS14145	0.64	+2.2
3,230,482	+		BPHYT_RS14145	0.84	+0.7
3,230,482	+		BPHYT_RS14145	0.84	-0.5
3,230,483	-		BPHYT_RS14145	0.84	+1.8
3,230,483	-		BPHYT_RS14145	0.84	+2.1
3,230,483	-		BPHYT_RS14145	0.84	+1.5
3,230,483	-		BPHYT_RS14145	0.84	+1.0
3,230,483	-		BPHYT_RS14145	0.84	+1.3
3,230,512	+		BPHYT_RS14145	0.87	+1.1
3,230,512	+		BPHYT_RS14145	0.87	-0.3
3,230,513	-		BPHYT_RS14145	0.87	+1.4
3,230,676	+				+1.1
3,230,676	+				+0.6
3,230,677	-				-0.2
3,230,677	-				-1.7
3,230,698	-				-1.4
3,230,717	-				+0.3
3,230,727	-				-1.1
3,230,755	-				+1.9
3,230,819	+				+0.0
3,230,824	+				+0.1
3,230,919	+				-0.4
3,230,934	+				-1.1
3,231,917	-		BPHYT_RS14150	0.58	+0.2
3,232,464	+				+1.2
3,232,464	+				+1.4
3,232,476	+				-1.6
3,232,477	-				+1.8
3,232,501	+				-0.8
3,232,528	-				-0.3
3,232,528	-				+0.6
3,232,573	-				-0.4