Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12720

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,901,204	+				+0.1
2,901,205	-				+0.1
2,901,205	-				+0.9
2,901,205	-				-0.8
2,901,205	-				-0.9
2,901,463	+		BPHYT_RS12725	0.22	+1.7
2,901,554	+		BPHYT_RS12725	0.30	+1.7
2,901,676	+		BPHYT_RS12725	0.40	+1.4
2,901,676	+		BPHYT_RS12725	0.40	+1.9
2,901,677	-		BPHYT_RS12725	0.40	+1.6
2,901,677	-		BPHYT_RS12725	0.40	+1.6
2,901,677	-		BPHYT_RS12725	0.40	+1.6
2,901,920	+		BPHYT_RS12725	0.61	+0.4
2,901,920	+		BPHYT_RS12725	0.61	+2.1
2,902,065	+		BPHYT_RS12725	0.73	+1.9
2,902,065	+		BPHYT_RS12725	0.73	+1.9
2,902,065	+		BPHYT_RS12725	0.73	+2.2
2,902,065	+		BPHYT_RS12725	0.73	-0.9
2,902,066	-		BPHYT_RS12725	0.74	+2.0
2,902,066	-		BPHYT_RS12725	0.74	+2.0
2,902,066	-		BPHYT_RS12725	0.74	+1.8
2,902,067	+		BPHYT_RS12725	0.74	+1.6
2,902,067	+		BPHYT_RS12725	0.74	+1.9
2,902,067	+		BPHYT_RS12725	0.74	+1.8
2,902,068	-		BPHYT_RS12725	0.74	+1.8
2,902,068	-		BPHYT_RS12725	0.74	+1.5
2,902,068	-		BPHYT_RS12725	0.74	+1.9
2,902,068	-		BPHYT_RS12725	0.74	+1.6
2,902,068	-		BPHYT_RS12725	0.74	+2.1