Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11820

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,679,028	-		BPHYT_RS11815	0.19	-1.9
2,679,073	+		BPHYT_RS11815	0.23	-1.1
2,679,150	+		BPHYT_RS11815	0.30	+3.8
2,679,151	-		BPHYT_RS11815	0.31	+2.2
2,679,699	+		BPHYT_RS11815	0.84	-1.1
2,679,700	-		BPHYT_RS11815	0.84	+0.0
2,679,764	-				+1.2
2,679,815	+				-0.3
2,680,156	-		BPHYT_RS11820	0.10	-0.9
2,680,405	+		BPHYT_RS11820	0.27	-1.0
2,680,798	+		BPHYT_RS11820	0.54	+0.5
2,680,799	-		BPHYT_RS11820	0.54	+0.0
2,680,880	-		BPHYT_RS11820	0.60	-0.6
2,680,880	-		BPHYT_RS11820	0.60	+0.5
2,680,926	-		BPHYT_RS11820	0.63	-0.2
2,682,144	+		BPHYT_RS11825	0.53	+0.7