Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11145
Experiment: 36hr PHYTO1 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO1 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,532,156 | + | BPHYT_RS11140 | 0.38 | +1.7 | |
2,532,621 | - | BPHYT_RS11140 | 0.71 | +0.0 | |
2,533,847 | - | -0.1 | |||
2,533,979 | - | -0.4 | |||
2,533,982 | - | -0.4 | |||
2,534,065 | + | -0.7 | |||
2,534,065 | + | -1.9 | |||
2,534,555 | + | BPHYT_RS11150 | 0.52 | -1.4 |
Or see this region's nucleotide sequence