Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10115

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,303,326	-		BPHYT_RS10110	0.18	+0.1
2,303,326	-		BPHYT_RS10110	0.18	+0.1
2,303,394	+		BPHYT_RS10110	0.27	-1.7
2,303,395	-		BPHYT_RS10110	0.27	+0.3
2,303,427	+		BPHYT_RS10110	0.31	-1.1
2,303,428	-		BPHYT_RS10110	0.31	+0.3
2,303,772	+		BPHYT_RS10110	0.76	-0.6
2,303,773	-		BPHYT_RS10110	0.76	+0.2
2,303,773	-		BPHYT_RS10110	0.76	-0.3
2,304,145	+				-1.6
2,304,146	-				-0.0
2,304,676	+		BPHYT_RS10115	0.67	-2.7
2,304,765	+		BPHYT_RS10115	0.79	-1.6
2,304,852	+				-0.7
2,304,852	+				-1.6
2,304,852	+				+0.3
2,304,864	+				+0.2
2,304,998	+				-0.3
2,304,998	+				-0.5
2,304,999	-				+0.2
2,305,102	+				-0.0
2,305,102	+				+0.0
2,305,196	+				+0.3
2,305,261	+		BPHYT_RS10120	0.12	-0.3
2,305,262	-		BPHYT_RS10120	0.12	-0.6
2,305,262	-		BPHYT_RS10120	0.12	-0.7
2,305,262	-		BPHYT_RS10120	0.12	+1.7
2,305,806	+				+0.6