Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07025

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
1,587,435	-		BPHYT_RS07020	0.35	-1.1
1,587,544	+		BPHYT_RS07020	0.44	-1.6
1,587,545	-		BPHYT_RS07020	0.44	+0.4
1,587,545	-		BPHYT_RS07020	0.44	-2.2
1,587,545	-		BPHYT_RS07020	0.44	+0.0
1,587,729	-		BPHYT_RS07020	0.60	-1.4
1,587,992	-		BPHYT_RS07020	0.84	-1.0
1,587,992	-		BPHYT_RS07020	0.84	-0.1
1,587,992	-		BPHYT_RS07020	0.84	-0.3
1,587,992	-		BPHYT_RS07020	0.84	-0.4
1,588,067	-				-0.5
1,588,080	-				-0.1
1,588,340	-				-0.6
1,588,439	+		BPHYT_RS07025	0.11	-0.8
1,588,440	-		BPHYT_RS07025	0.11	-0.5
1,588,541	+		BPHYT_RS07025	0.19	-0.4
1,588,599	+		BPHYT_RS07025	0.24	+0.4
1,588,600	-		BPHYT_RS07025	0.24	+3.2
1,588,600	-		BPHYT_RS07025	0.24	-0.6
1,588,646	+		BPHYT_RS07025	0.28	+0.3
1,588,647	-		BPHYT_RS07025	0.28	+0.2
1,590,505	+				+0.3
1,590,508	+				-0.2