Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06550

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
1,486,816	+		BPHYT_RS06545	0.80	+0.2
1,486,844	+		BPHYT_RS06545	0.81	+0.1
1,486,931	+		BPHYT_RS06545	0.86	-0.0
1,486,943	+		BPHYT_RS06545	0.87	-0.5
1,486,943	+		BPHYT_RS06545	0.87	+1.6
1,486,943	+		BPHYT_RS06545	0.87	+0.5
1,486,943	+		BPHYT_RS06545	0.87	-0.5
1,487,166	+				+0.4
1,487,363	+		BPHYT_RS06550	0.16	+0.1
1,487,599	+		BPHYT_RS06550	0.64	-2.2
1,487,701	+		BPHYT_RS06550	0.85	-1.3
1,487,818	+				-2.0
1,487,840	+				+0.1
1,487,840	+				-0.6
1,487,840	+				-0.7
1,487,840	+				+2.2
1,487,840	+				+0.9
1,487,841	-				-0.7
1,487,841	-				-0.8
1,487,841	-				+0.1
1,487,841	-				+0.1
1,487,841	-				+0.2
1,487,842	+				-0.6
1,487,842	+				-0.2
1,487,842	+				+0.4
1,487,842	+				-0.2
1,487,842	+				-1.1
1,487,843	-				+0.2
1,487,843	-				-0.4
1,488,157	+		BPHYT_RS06555	0.26	-0.6
1,488,158	-		BPHYT_RS06555	0.26	+1.6
1,488,229	+		BPHYT_RS06555	0.33	-0.9
1,488,230	-		BPHYT_RS06555	0.33	+0.1
1,488,310	+		BPHYT_RS06555	0.41	+0.7
1,488,544	+		BPHYT_RS06555	0.64	+0.0
1,488,545	-		BPHYT_RS06555	0.64	+0.3
1,488,562	+		BPHYT_RS06555	0.66	+0.6
1,488,562	+		BPHYT_RS06555	0.66	+0.1
1,488,634	+		BPHYT_RS06555	0.73	+0.2
1,488,749	-		BPHYT_RS06555	0.84	+0.5