Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35535

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,570,130	-				+0.3
3,570,182	-				+0.2
3,570,351	+		BPHYT_RS35525	0.41	-0.5
3,570,510	+		BPHYT_RS35525	0.76	+0.0
3,570,510	+		BPHYT_RS35525	0.76	-0.5
3,570,511	-		BPHYT_RS35525	0.76	-0.9
3,570,649	+				+3.5
3,570,650	-				-0.1
3,570,754	+		BPHYT_RS35530	0.26	+0.9
3,570,810	+		BPHYT_RS35530	0.39	-0.3
3,570,893	-		BPHYT_RS35530	0.59	-0.2
3,571,049	+				-0.3
3,571,065	+				+2.6
3,571,066	-				+0.1
3,571,313	-		BPHYT_RS35535	0.23	-0.3
3,571,484	-		BPHYT_RS35535	0.39	-0.5
3,571,599	+		BPHYT_RS35535	0.49	+2.6
3,571,600	-		BPHYT_RS35535	0.50	+0.0
3,571,766	-		BPHYT_RS35535	0.65	-1.3
3,571,766	-		BPHYT_RS35535	0.65	-2.2
3,572,138	+				-0.7
3,572,253	+		BPHYT_RS35540	0.33	+0.0
3,572,253	+		BPHYT_RS35540	0.33	+0.4
3,572,253	+		BPHYT_RS35540	0.33	-0.5
3,572,450	+				-0.0
3,572,481	+				+0.7
3,572,567	+				+0.2
3,572,598	-				+0.4
3,572,668	+				-0.9
3,572,837	+		BPHYT_RS35545	0.20	+1.5
3,573,117	-		BPHYT_RS35545	0.62	+0.1