Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34585

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,366,003	+		BPHYT_RS34575	0.90	-0.6
3,366,027	+				+0.8
3,366,126	+				+0.3
3,366,283	+				-0.7
3,366,691	-		BPHYT_RS34580	0.66	-0.5
3,366,720	-		BPHYT_RS34580	0.70	-0.2
3,366,720	-		BPHYT_RS34580	0.70	+0.7
3,366,841	+		BPHYT_RS34580	0.87	-0.6
3,366,842	-		BPHYT_RS34580	0.88	+0.1
3,366,843	+		BPHYT_RS34580	0.88	-0.1
3,366,843	+		BPHYT_RS34580	0.88	+0.2
3,367,050	-		BPHYT_RS34585	0.31	-0.2
3,367,110	+		BPHYT_RS34585	0.45	-1.5
3,367,111	-		BPHYT_RS34585	0.46	-1.0
3,367,175	+		BPHYT_RS34585	0.61	-1.8
3,367,176	-		BPHYT_RS34585	0.62	+0.2
3,367,176	-		BPHYT_RS34585	0.62	+2.9
3,367,180	-		BPHYT_RS34585	0.62	-2.1
3,367,180	-		BPHYT_RS34585	0.62	-0.9
3,367,729	+		BPHYT_RS34590	0.12	-1.0
3,367,730	-		BPHYT_RS34590	0.12	-1.1
3,367,730	-		BPHYT_RS34590	0.12	-1.2
3,367,753	+		BPHYT_RS34590	0.14	+0.1
3,367,783	+		BPHYT_RS34590	0.16	+0.3
3,367,784	-		BPHYT_RS34590	0.16	-0.0