Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33810

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,177,153	-		BPHYT_RS33800	0.89	-0.4
3,177,407	+				+0.1
3,177,510	+				+0.2
3,177,788	-		BPHYT_RS33805	0.62	-2.5
3,178,114	-		BPHYT_RS33810	0.37	-0.8
3,178,114	-		BPHYT_RS33810	0.37	-0.6
3,178,356	+		BPHYT_RS33810	0.70	+0.9
3,178,599	-				-0.8
3,179,066	+		BPHYT_RS33815	0.32	+0.3
3,179,067	-		BPHYT_RS33815	0.33	-1.0
3,179,067	-		BPHYT_RS33815	0.33	-0.1
3,179,067	-		BPHYT_RS33815	0.33	-0.8
3,179,432	+		BPHYT_RS33815	0.60	-1.6
3,179,520	-		BPHYT_RS33815	0.66	+0.7
3,179,541	-		BPHYT_RS33815	0.68	+1.1