Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33385

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,072,576	+		BPHYT_RS33380	0.31	+0.2
3,073,102	-		BPHYT_RS33380	0.82	-0.9
3,073,111	+		BPHYT_RS33380	0.82	-0.5
3,073,111	+		BPHYT_RS33380	0.82	+0.3
3,073,144	-		BPHYT_RS33380	0.86	-0.0
3,073,155	+		BPHYT_RS33380	0.87	+1.2
3,073,403	+				+0.1
3,073,403	+				+0.2
3,073,511	+		BPHYT_RS33385	0.13	-1.2
3,074,451	-		BPHYT_RS33385	0.87	-0.3
3,074,728	+				-0.5
3,074,838	+		BPHYT_RS33390	0.20	+0.5
3,074,839	-		BPHYT_RS33390	0.20	+0.5
3,074,998	+		BPHYT_RS33390	0.35	+2.3
3,075,056	+		BPHYT_RS33390	0.41	+0.5
3,075,056	+		BPHYT_RS33390	0.41	+1.9
3,075,093	-		BPHYT_RS33390	0.44	-0.4
3,075,297	+		BPHYT_RS33390	0.64	-0.6
3,075,298	-		BPHYT_RS33390	0.64	+3.7
3,075,298	-		BPHYT_RS33390	0.64	-0.1
3,075,346	+		BPHYT_RS33390	0.69	-1.4
3,075,599	-				+0.4
3,075,600	+				+1.3