Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32440

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,849,642	+				-1.8
2,849,713	-		BPHYT_RS32435	0.11	+1.4
2,850,066	+		BPHYT_RS32435	0.49	-0.2
2,850,067	-		BPHYT_RS32435	0.49	+0.9
2,850,346	-		BPHYT_RS32435	0.79	-0.7
2,850,549	+				+3.6
2,850,757	+				-1.3
2,850,758	-				-0.7
2,850,913	-		BPHYT_RS32440	0.15	-0.6
2,850,913	-		BPHYT_RS32440	0.15	-0.7
2,851,029	+		BPHYT_RS32440	0.20	+0.5
2,851,057	-		BPHYT_RS32440	0.21	+0.0
2,851,272	+		BPHYT_RS32440	0.30	-0.9
2,851,272	+		BPHYT_RS32440	0.30	-0.1
2,851,483	+		BPHYT_RS32440	0.38	+0.1
2,851,484	-		BPHYT_RS32440	0.39	-0.2
2,851,960	-		BPHYT_RS32440	0.58	+0.3
2,852,011	-		BPHYT_RS32440	0.60	+0.6
2,852,011	-		BPHYT_RS32440	0.60	+0.3
2,852,017	+		BPHYT_RS32440	0.60	+0.7
2,852,392	-		BPHYT_RS32440	0.76	-0.2
2,852,512	-		BPHYT_RS32440	0.81	-0.1
2,852,617	-		BPHYT_RS32440	0.85	-1.6
2,852,712	+		BPHYT_RS32440	0.89	-1.2
2,852,745	+				+0.6
2,852,746	-				-0.2
2,852,746	-				+0.5
2,852,746	-				+0.3
2,852,800	-				-0.4
2,852,803	-				+0.2
2,853,276	+		BPHYT_RS32445	0.42	-0.8
2,853,304	+		BPHYT_RS32445	0.47	-0.7
2,853,429	+		BPHYT_RS32445	0.68	-0.3
2,853,460	-		BPHYT_RS32445	0.73	+0.0
2,853,470	-		BPHYT_RS32445	0.75	+0.4
2,853,501	+		BPHYT_RS32445	0.80	-0.0
2,853,501	+		BPHYT_RS32445	0.80	-0.1
2,853,607	+				-0.4
2,853,607	+				+1.0
2,853,607	+				-0.5
2,853,607	+				+0.1
2,853,608	-				-0.6
2,853,608	-				+0.7
2,853,608	-				+0.0
2,853,635	+				-1.0
2,853,646	+				-0.5
2,853,646	+				-1.0
2,853,658	+				-0.4
2,853,659	-				-0.1
2,853,691	+				-0.6
2,853,691	+				+0.2
2,853,694	-				-0.3
2,853,741	-				+0.6
2,853,755	+				-0.6
2,853,756	-				-1.3
2,853,785	+				+0.0
2,853,808	+				-0.5
2,853,808	+				-1.3
2,853,808	+				-2.2
2,853,808	+				-1.9
2,853,809	-				-1.1
2,853,809	-				-0.3
2,853,847	+				+0.6
2,853,848	-				+1.0
2,853,851	+				-0.2
2,853,851	+				+0.4
2,853,851	+				-0.4
2,853,851	+				+0.2
2,853,947	-		BPHYT_RS32450	0.14	+1.3