Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31575

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,636,949	-		BPHYT_RS31570	0.31	-0.0
2,637,097	+		BPHYT_RS31570	0.66	-1.9
2,637,098	-		BPHYT_RS31570	0.66	-1.0
2,637,100	-		BPHYT_RS31570	0.67	-0.2
2,637,100	-		BPHYT_RS31570	0.67	-1.3
2,637,277	+				+0.3
2,637,403	+				-0.1
2,637,663	-				+0.1
2,637,684	-				+1.8
2,637,764	+				-0.0
2,637,866	-				+0.6
2,637,866	-				+0.1
2,637,870	-				-0.9
2,637,880	-				+1.0
2,637,905	-				+0.0
2,637,905	-				-0.7
2,637,933	+		BPHYT_RS31575	0.11	-0.7
2,637,974	-		BPHYT_RS31575	0.24	+0.7
2,637,994	+		BPHYT_RS31575	0.30	-0.7
2,637,997	-		BPHYT_RS31575	0.31	+0.3
2,638,208	-				+1.2
2,638,211	-				+0.7
2,638,224	-				+0.2
2,638,452	+				-2.5
2,638,453	-				+1.6
2,638,824	-				-0.9
2,638,856	-				-1.1
2,639,053	+		BPHYT_RS31585	0.53	-0.1
2,639,195	-		BPHYT_RS31585	0.86	-1.1
2,639,195	-		BPHYT_RS31585	0.86	-0.6