Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31570

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,636,068	-				-0.2
2,636,068	-				-0.4
2,636,151	+				-0.5
2,636,288	-				+2.1
2,636,339	-				-1.0
2,636,582	-				+1.0
2,636,582	-				-0.5
2,636,587	+				-1.0
2,636,784	-				+0.8
2,636,784	-				+1.3
2,636,894	+		BPHYT_RS31570	0.18	-1.3
2,636,949	-		BPHYT_RS31570	0.31	-0.0
2,637,097	+		BPHYT_RS31570	0.66	-1.9
2,637,098	-		BPHYT_RS31570	0.66	-1.0
2,637,100	-		BPHYT_RS31570	0.67	-0.2
2,637,100	-		BPHYT_RS31570	0.67	-1.3
2,637,277	+				+0.3
2,637,403	+				-0.1
2,637,663	-				+0.1
2,637,684	-				+1.8
2,637,764	+				-0.0
2,637,866	-				+0.6
2,637,866	-				+0.1
2,637,870	-				-0.9
2,637,880	-				+1.0
2,637,905	-				+0.0
2,637,905	-				-0.7
2,637,933	+		BPHYT_RS31575	0.11	-0.7
2,637,974	-		BPHYT_RS31575	0.24	+0.7
2,637,994	+		BPHYT_RS31575	0.30	-0.7
2,637,997	-		BPHYT_RS31575	0.31	+0.3
2,638,208	-				+1.2
2,638,211	-				+0.7
2,638,224	-				+0.2