Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31190

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,554,390	+		BPHYT_RS31185	0.11	+0.9
2,554,390	+		BPHYT_RS31185	0.11	-0.8
2,554,687	+		BPHYT_RS31185	0.44	-0.2
2,554,809	-		BPHYT_RS31185	0.57	-0.5
2,554,809	-		BPHYT_RS31185	0.57	-0.5
2,554,809	-		BPHYT_RS31185	0.57	-1.2
2,555,220	-				-1.2
2,555,220	-				-0.2
2,555,220	-				+0.1
2,555,220	-				+0.8
2,555,408	+				+0.9
2,555,530	+		BPHYT_RS31190	0.19	-1.8
2,555,531	-		BPHYT_RS31190	0.20	-0.3
2,555,531	-		BPHYT_RS31190	0.20	-1.2
2,555,670	-		BPHYT_RS31190	0.34	-0.8
2,555,670	-		BPHYT_RS31190	0.34	+1.0
2,555,996	-		BPHYT_RS31190	0.67	+0.3
2,556,271	+				-0.6
2,556,317	+				-1.3
2,556,600	+		BPHYT_RS31195	0.32	-1.4
2,556,838	-		BPHYT_RS31195	0.58	-0.7
2,556,888	+		BPHYT_RS31195	0.63	-2.2
2,556,889	-		BPHYT_RS31195	0.64	-1.6