Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31115

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,534,865	+		BPHYT_RS31105	0.58	+0.8
2,534,977	-		BPHYT_RS31105	0.71	-0.7
2,535,100	-		BPHYT_RS31105	0.84	+2.2
2,535,167	-				-1.2
2,535,167	-				-0.3
2,535,345	-				+1.0
2,535,637	+		BPHYT_RS31110	0.51	-0.7
2,535,638	-		BPHYT_RS31110	0.52	+0.7
2,536,376	-		BPHYT_RS31115	0.19	-1.5
2,536,377	-		BPHYT_RS31115	0.19	-0.5
2,536,502	+		BPHYT_RS31115	0.24	-0.1
2,536,704	+		BPHYT_RS31115	0.31	-0.9
2,537,170	+		BPHYT_RS31115	0.48	+0.7
2,537,198	+		BPHYT_RS31115	0.49	+0.1
2,537,201	-		BPHYT_RS31115	0.49	+0.3
2,537,201	-		BPHYT_RS31115	0.49	+0.1
2,537,447	-		BPHYT_RS31115	0.58	+0.2
2,537,626	+		BPHYT_RS31115	0.65	-0.2
2,537,898	-		BPHYT_RS31115	0.75	+0.2
2,538,033	-		BPHYT_RS31115	0.80	+1.8
2,538,033	-		BPHYT_RS31115	0.80	-0.3
2,538,187	+		BPHYT_RS31115	0.85	+1.8
2,538,193	+		BPHYT_RS31115	0.85	-0.1
2,538,209	-		BPHYT_RS31115	0.86	-1.6
2,538,452	-				-0.1
2,538,458	+				+0.3
2,538,623	+				-0.6
2,538,624	-				+0.1
2,539,060	+		BPHYT_RS31120	0.36	+0.4
2,539,061	-		BPHYT_RS31120	0.36	-1.8
2,539,061	-		BPHYT_RS31120	0.36	-0.4
2,539,061	-		BPHYT_RS31120	0.36	-0.6