Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29385

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,146,876	+		BPHYT_RS29380	0.53	+0.4
2,146,977	-		BPHYT_RS29380	0.70	+0.4
2,147,251	-				+1.3
2,147,329	-				-1.5
2,147,346	+				-0.2
2,147,347	-				-1.2
2,147,660	-				-0.1
2,147,705	+				+0.5
2,147,753	-				+1.0
2,148,343	+		BPHYT_RS29385	0.57	+1.3
2,148,392	-		BPHYT_RS29385	0.61	-0.3
2,148,443	-		BPHYT_RS29385	0.65	-0.8
2,148,703	+		BPHYT_RS29385	0.87	-1.9
2,148,703	+		BPHYT_RS29385	0.87	-2.1
2,148,704	-		BPHYT_RS29385	0.87	-0.1
2,148,741	-		BPHYT_RS29385	0.90	-0.6
2,148,815	-				-1.0
2,149,056	+				-0.2
2,149,132	+				+0.4
2,149,230	+				-0.2
2,149,230	+				-0.5
2,149,231	-				+0.2
2,149,231	-				+0.4
2,149,276	-				-0.5
2,149,276	-				-0.3
2,149,286	+				-1.9