Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29275

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,123,618	-		BPHYT_RS29270	0.66	+0.4
2,124,020	+				+1.1
2,124,209	-		BPHYT_RS29275	0.13	+0.3
2,124,209	-		BPHYT_RS29275	0.13	+0.3
2,124,347	+		BPHYT_RS29275	0.27	-2.0
2,124,391	+		BPHYT_RS29275	0.32	+0.3
2,124,398	-				+1.1
2,124,574	-		BPHYT_RS29275	0.51	+0.3
2,124,574	-		BPHYT_RS29275	0.51	+0.1
2,124,872	-		BPHYT_RS29275	0.82	+0.8
2,124,998	-				-0.6
2,125,129	-				-0.1
2,125,316	-				-0.4
2,125,355	-		BPHYT_RS29280	0.12	-0.2
2,125,394	-		BPHYT_RS29280	0.15	-1.5
2,125,907	+		BPHYT_RS29280	0.53	-0.8
2,125,999	-		BPHYT_RS29280	0.60	-0.2