Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29225

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,112,160	+		BPHYT_RS29220	0.35	+0.3
2,112,207	-		BPHYT_RS29220	0.41	-0.5
2,112,208	+		BPHYT_RS29220	0.41	-0.8
2,112,252	-		BPHYT_RS29220	0.47	-1.1
2,112,458	-		BPHYT_RS29220	0.75	+0.1
2,112,560	-		BPHYT_RS29220	0.89	-0.2
2,112,578	-				-0.1
2,112,772	-				+0.3
2,112,829	-				+0.1
2,112,894	+				-0.2
2,113,101	+		BPHYT_RS29225	0.13	-0.2
2,113,114	-		BPHYT_RS29225	0.14	-1.3
2,113,349	+		BPHYT_RS29225	0.25	+0.1
2,113,401	+		BPHYT_RS29225	0.28	+2.6
2,114,050	-		BPHYT_RS29225	0.59	-0.1
2,114,050	-		BPHYT_RS29225	0.59	-0.8
2,114,999	-				-0.8
2,115,040	+				+0.1
2,115,436	-		BPHYT_RS29230	0.51	-0.2
2,115,442	+		BPHYT_RS29230	0.51	+0.1
2,115,442	+		BPHYT_RS29230	0.51	+0.3