Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24335

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
1,025,533	+				-0.8
1,025,533	+				+1.5
1,025,534	-				-0.1
1,025,534	-				+0.2
1,025,679	-				-0.7
1,025,695	-				-0.3
1,025,727	+				+0.5
1,025,727	+				-0.6
1,025,727	+				-0.5
1,025,728	-				-0.8
1,025,728	-				-0.2
1,026,087	-		BPHYT_RS24335	0.25	-3.2
1,026,278	+		BPHYT_RS24335	0.39	+0.2
1,026,302	+		BPHYT_RS24335	0.41	-1.7
1,026,302	+		BPHYT_RS24335	0.41	-0.6
1,026,303	-		BPHYT_RS24335	0.41	-0.9
1,026,303	-		BPHYT_RS24335	0.41	-1.2
1,026,388	+		BPHYT_RS24335	0.47	-1.3
1,026,840	-		BPHYT_RS24335	0.81	-0.2
1,026,999	-				-1.2
1,027,483	-				+0.4
1,027,502	-				+0.3
1,027,622	-				+0.0
1,027,622	-				-1.2
1,027,749	+				+0.2
1,027,752	+				-0.6
1,027,752	+				-0.2
1,027,753	-				-0.6
1,027,753	-				+0.4
1,027,753	-				-0.2
1,027,753	-				+0.2