Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS20435

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
146,304	-		BPHYT_RS20425	0.73	+0.0
146,307	-		BPHYT_RS20425	0.74	-0.5
146,466	+				-0.4
146,466	+				+0.8
146,467	-				+0.3
146,467	-				-0.8
146,509	-				-0.2
146,596	+				+0.2
146,596	+				-2.2
146,597	-				-0.3
146,792	-		BPHYT_RS20430	0.34	-0.7
146,792	-		BPHYT_RS20430	0.34	+0.4
147,074	+				-0.1
147,075	-				-0.8
147,075	-				-0.4
147,078	+				-0.2
147,079	-				-0.1
147,079	-				-0.5
147,079	-				-0.1
147,079	-				-1.5
147,080	+				-0.1
147,080	+				-0.2
147,153	+				-0.2
147,156	+				+0.0
147,190	+				+0.2
147,402	+		BPHYT_RS20435	0.18	+0.6
147,556	-		BPHYT_RS20435	0.29	+0.6
147,619	+		BPHYT_RS20435	0.34	-0.1
147,753	+		BPHYT_RS20435	0.43	-0.2
147,908	-		BPHYT_RS20435	0.55	+1.1
147,909	+		BPHYT_RS20435	0.55	+0.5
147,910	-		BPHYT_RS20435	0.55	-1.7
147,910	-		BPHYT_RS20435	0.55	+0.8
147,910	-		BPHYT_RS20435	0.55	+1.3
147,964	-		BPHYT_RS20435	0.59	+0.4
148,065	+		BPHYT_RS20435	0.66	-0.3
148,065	+		BPHYT_RS20435	0.66	-0.0
148,066	-		BPHYT_RS20435	0.66	-0.1
148,185	-		BPHYT_RS20435	0.75	+0.2
148,675	-				+0.1
149,426	+		BPHYT_RS20440	0.84	-0.6