Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16140

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,660,194	-		BPHYT_RS16135	0.29	-0.0
3,660,195	+		BPHYT_RS16135	0.29	-0.2
3,660,196	-		BPHYT_RS16135	0.29	+0.2
3,660,377	+		BPHYT_RS16135	0.48	-0.7
3,660,378	-		BPHYT_RS16135	0.48	-0.8
3,660,593	-		BPHYT_RS16135	0.71	-1.6
3,660,593	-		BPHYT_RS16135	0.71	+0.2
3,660,593	-		BPHYT_RS16135	0.71	-1.7
3,660,635	+		BPHYT_RS16135	0.76	-0.4
3,660,636	-		BPHYT_RS16135	0.76	+0.8
3,661,229	-		BPHYT_RS16140	0.48	-0.7
3,661,559	+		BPHYT_RS16140	0.90	-0.7
3,661,674	-				-0.7
3,661,759	+				+0.7
3,661,759	+				-0.2
3,661,760	-				-0.7
3,661,760	-				-1.5
3,661,763	-				-2.2
3,661,774	+				+0.3
3,661,942	+		BPHYT_RS16145	0.29	-0.1
3,661,942	+		BPHYT_RS16145	0.29	-0.9
3,662,179	+		BPHYT_RS16145	0.56	-0.5
3,662,180	-		BPHYT_RS16145	0.57	-0.1
3,662,180	-		BPHYT_RS16145	0.57	-1.1
3,662,180	-		BPHYT_RS16145	0.57	+0.0
3,662,180	-		BPHYT_RS16145	0.57	+0.0
3,662,185	+		BPHYT_RS16145	0.57	+0.1
3,662,185	+		BPHYT_RS16145	0.57	-1.2
3,662,185	+		BPHYT_RS16145	0.57	+0.5
3,662,185	+		BPHYT_RS16145	0.57	-0.4
3,662,398	+		BPHYT_RS16145	0.82	-0.1
3,662,398	+		BPHYT_RS16145	0.82	-0.1
3,662,399	-		BPHYT_RS16145	0.82	-1.5
3,662,399	-		BPHYT_RS16145	0.82	-0.3
3,662,450	-		BPHYT_RS16145	0.88	-0.2
3,662,450	-		BPHYT_RS16145	0.88	+0.2
3,662,450	-		BPHYT_RS16145	0.88	-0.4
3,662,497	+				-0.8
3,662,498	-				+0.1
3,662,568	+				-0.4