Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15960

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,621,455	-		BPHYT_RS15950	0.76	-0.6
3,621,701	+				-0.8
3,621,873	+		BPHYT_RS15955	0.43	+0.2
3,621,873	+		BPHYT_RS15955	0.43	-0.5
3,621,874	-		BPHYT_RS15955	0.43	+0.9
3,621,988	-		BPHYT_RS15955	0.67	+0.2
3,622,062	+		BPHYT_RS15955	0.83	-0.8
3,622,190	+				-0.1
3,622,224	-				-0.2
3,622,247	+				-1.0
3,622,329	+				+0.1
3,622,330	-				+0.4
3,622,601	-		BPHYT_RS15960	0.28	+0.0
3,622,640	+		BPHYT_RS15960	0.31	-0.2
3,622,641	-		BPHYT_RS15960	0.31	+1.0
3,622,696	+		BPHYT_RS15960	0.36	-0.1
3,622,877	+		BPHYT_RS15960	0.51	-0.1
3,622,877	+		BPHYT_RS15960	0.51	-0.4
3,622,877	+		BPHYT_RS15960	0.51	-0.0
3,622,877	+		BPHYT_RS15960	0.51	-0.4
3,622,877	+		BPHYT_RS15960	0.51	-0.5
3,622,878	-		BPHYT_RS15960	0.51	+2.9
3,622,878	-		BPHYT_RS15960	0.51	+0.3
3,622,951	-		BPHYT_RS15960	0.56	-0.7
3,622,957	+		BPHYT_RS15960	0.57	-0.5
3,623,029	+		BPHYT_RS15960	0.63	+0.8
3,623,048	-		BPHYT_RS15960	0.64	+0.8
3,623,176	+		BPHYT_RS15960	0.75	+0.2
3,623,176	+		BPHYT_RS15960	0.75	+0.2
3,623,192	+		BPHYT_RS15960	0.76	+0.5
3,623,260	+		BPHYT_RS15960	0.81	+0.6
3,623,260	+		BPHYT_RS15960	0.81	+1.2