Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15335

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,481,652	+		BPHYT_RS15325	0.66	-0.4
3,481,680	-		BPHYT_RS15325	0.69	-0.2
3,481,680	-		BPHYT_RS15325	0.69	+0.6
3,481,858	+				+0.2
3,481,858	+				+0.7
3,481,859	-				+0.1
3,482,301	+		BPHYT_RS15330	0.62	+0.6
3,482,302	-		BPHYT_RS15330	0.62	+0.8
3,482,302	-		BPHYT_RS15330	0.62	+0.2
3,482,425	-		BPHYT_RS15330	0.81	+0.0
3,482,648	+				+0.8
3,482,648	+				+0.0
3,482,648	+				+0.6
3,482,649	-				+0.9
3,482,649	-				+0.8
3,482,649	-				+0.6
3,482,684	+		BPHYT_RS15335	0.11	+0.7
3,482,685	-		BPHYT_RS15335	0.12	+0.5
3,482,738	+		BPHYT_RS15335	0.16	+1.1
3,482,803	+		BPHYT_RS15335	0.21	+0.8
3,482,803	+		BPHYT_RS15335	0.21	+0.6
3,482,803	+		BPHYT_RS15335	0.21	-0.1
3,482,803	+		BPHYT_RS15335	0.21	+0.3
3,482,803	+		BPHYT_RS15335	0.21	+0.9
3,482,804	-		BPHYT_RS15335	0.21	+0.6
3,482,804	-		BPHYT_RS15335	0.21	-0.1
3,482,804	-		BPHYT_RS15335	0.21	-0.3
3,482,804	-		BPHYT_RS15335	0.21	+0.0
3,482,804	-		BPHYT_RS15335	0.21	+1.5
3,483,200	+		BPHYT_RS15335	0.53	+0.8
3,483,326	+		BPHYT_RS15335	0.64	-1.0
3,483,326	+		BPHYT_RS15335	0.64	+0.7
3,483,342	-		BPHYT_RS15335	0.65	+0.0
3,483,380	+		BPHYT_RS15335	0.68	+0.4
3,483,381	-		BPHYT_RS15335	0.68	+0.7
3,483,424	+		BPHYT_RS15335	0.72	+1.5
3,483,425	-		BPHYT_RS15335	0.72	+0.6
3,483,678	+				+0.3
3,483,678	+				+0.6
3,483,678	+				+0.8
3,483,679	-				+0.4
3,483,679	-				+0.4
3,483,986	-				+2.5
3,484,007	+				-2.1
3,484,007	+				+0.5
3,484,127	-				-0.4
3,484,239	-				-0.7
3,484,249	+				+1.2
3,484,250	-				+0.2
3,484,250	-				+0.3
3,484,261	-				-0.8
3,484,392	-				-0.4
3,484,551	+				-0.1
3,484,551	+				+0.2
3,484,552	-				-0.9
3,484,552	-				-0.7
3,484,552	-				-0.7
3,484,560	-				-0.3
3,484,579	+				-0.9
3,484,580	-				+0.8
3,484,583	+				-0.5
3,484,583	+				+0.5
3,484,584	-				-0.6
3,484,584	-				-0.5
3,484,584	-				-1.4
3,484,617	-				-0.7
3,484,641	+				-0.6
3,484,641	+				-2.0
3,484,642	-				+0.7
3,484,643	+				+0.5
3,484,643	+				-0.4
3,484,643	+				+0.2
3,484,644	-				+0.1
3,484,644	-				-0.2
3,484,679	-				-0.6
3,484,683	+				-0.1