Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13515

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,082,977	-		BPHYT_RS13510	0.38	-0.7
3,082,977	-		BPHYT_RS13510	0.38	+0.2
3,082,977	-		BPHYT_RS13510	0.38	+0.1
3,083,194	-		BPHYT_RS13510	0.56	+0.4
3,083,385	-		BPHYT_RS13510	0.71	-0.5
3,083,562	+		BPHYT_RS13510	0.85	+1.5
3,083,715	-				+0.3
3,083,715	-				-0.4
3,083,727	-				-0.5
3,083,847	+				-0.2
3,083,848	-				+0.5
3,084,267	+		BPHYT_RS13515	0.69	-1.2
3,084,268	-		BPHYT_RS13515	0.69	+0.3
3,084,331	-				+0.5
3,084,331	-		BPHYT_RS13515	0.79	-1.7
3,084,889	-		BPHYT_RS13520	0.31	-0.9
3,084,890	+		BPHYT_RS13520	0.31	+0.6
3,085,034	+		BPHYT_RS13520	0.41	-0.4
3,085,035	-		BPHYT_RS13520	0.41	+0.4
3,085,097	+		BPHYT_RS13520	0.45	-0.5
3,085,268	+		BPHYT_RS13520	0.57	+0.6