Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13150

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,001,967	+		BPHYT_RS13140	0.59	-1.5
3,001,968	-		BPHYT_RS13140	0.59	+0.7
3,002,304	+		BPHYT_RS13140	0.87	-0.5
3,002,305	-		BPHYT_RS13140	0.87	+0.7
3,002,317	-		BPHYT_RS13140	0.88	-0.8
3,002,926	-				-0.7
3,002,971	+				+1.4
3,003,025	+		BPHYT_RS13150	0.13	+0.8
3,003,556	-				+1.3
3,003,626	+				-0.8
3,003,627	-				+0.8
3,003,627	-				+1.5
3,003,627	-				+0.8
3,003,821	+				+2.0
3,003,822	-				+0.2
3,003,865	+				-1.4
3,003,866	-				-0.4
3,003,866	-				+0.5
3,003,938	+		BPHYT_RS13155	0.13	-0.4
3,003,989	-		BPHYT_RS13155	0.22	-0.2
3,004,004	+		BPHYT_RS13155	0.24	-1.4
3,004,005	-		BPHYT_RS13155	0.25	+0.5
3,004,278	-		BPHYT_RS13155	0.72	-0.2
3,004,278	-		BPHYT_RS13155	0.72	-0.8
3,004,538	+				-0.2