Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13140

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
3,000,495	+				+1.0
3,000,495	+				-1.2
3,000,496	-				-0.5
3,000,717	-		BPHYT_RS13135	0.31	+0.1
3,000,967	-		BPHYT_RS13135	0.82	+0.4
3,000,968	+		BPHYT_RS13135	0.82	+1.0
3,000,969	-		BPHYT_RS13135	0.83	-2.9
3,001,041	+				-0.1
3,001,068	-				+0.7
3,001,869	+		BPHYT_RS13140	0.51	-0.4
3,001,967	+		BPHYT_RS13140	0.59	-1.5
3,001,968	-		BPHYT_RS13140	0.59	+0.7
3,002,304	+		BPHYT_RS13140	0.87	-0.5
3,002,305	-		BPHYT_RS13140	0.87	+0.7
3,002,317	-		BPHYT_RS13140	0.88	-0.8
3,002,926	-				-0.7
3,002,971	+				+1.4
3,003,025	+		BPHYT_RS13150	0.13	+0.8