Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09550

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
2,164,888	-				+0.8
2,164,904	+				-1.0
2,164,962	-		BPHYT_RS09545	0.18	+0.4
2,165,145	+		BPHYT_RS09545	0.61	+2.6
2,165,221	-		BPHYT_RS09545	0.79	+0.2
2,165,404	-				+0.2
2,165,494	+				+0.6
2,165,494	+				+0.3
2,165,617	-		BPHYT_RS09550	0.11	-0.8
2,166,077	-		BPHYT_RS09550	0.41	-0.4
2,166,082	+		BPHYT_RS09550	0.41	-0.6
2,166,182	+		BPHYT_RS09550	0.48	+0.6
2,166,183	-		BPHYT_RS09550	0.48	+0.2
2,166,183	-		BPHYT_RS09550	0.48	-0.5
2,166,183	-		BPHYT_RS09550	0.48	-0.4
2,166,532	+		BPHYT_RS09550	0.70	+0.0
2,166,533	-		BPHYT_RS09550	0.70	+0.5
2,166,632	+		BPHYT_RS09550	0.77	+0.1
2,166,632	+		BPHYT_RS09550	0.77	-1.1
2,166,633	-		BPHYT_RS09550	0.77	-0.6
2,166,721	+		BPHYT_RS09550	0.82	+1.0
2,167,025	+				+1.7
2,167,058	+				-0.3
2,167,059	-				+0.4
2,167,062	+				+1.3
2,167,062	+				+0.2
2,167,063	-				+0.6
2,167,189	-				+0.2
2,167,318	+				-0.0
2,167,321	-				-0.3
2,167,321	-				-0.0
2,167,321	-				-0.5
2,167,324	+				-0.0
2,167,325	-				-0.1
2,167,441	+		BPHYT_RS09555	0.15	-0.0
2,167,441	+		BPHYT_RS09555	0.15	-1.9
2,167,513	+		BPHYT_RS09555	0.19	+1.6
2,167,514	-		BPHYT_RS09555	0.19	+0.1
2,167,514	-		BPHYT_RS09555	0.19	+1.4
2,167,670	-		BPHYT_RS09555	0.29	+0.3
2,167,670	-		BPHYT_RS09555	0.29	-0.6
2,167,703	-		BPHYT_RS09555	0.30	-0.3
2,167,739	-		BPHYT_RS09555	0.33	+0.7
2,167,739	-		BPHYT_RS09555	0.33	-0.8