Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08640

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
1,968,771	+				+1.5
1,968,792	+				-0.1
1,968,793	-				+0.2
1,968,793	-				+0.8
1,968,793	-				-0.2
1,968,793	-				-0.8
1,968,793	-				-0.4
1,968,794	+				+0.9
1,968,794	+				-0.1
1,968,795	-				-1.0
1,968,795	-				+0.4
1,968,795	-				+0.0
1,968,796	+				-2.8
1,968,796	+				-0.5
1,968,796	+				+0.9
1,968,796	+				+0.7
1,968,797	-				-0.8
1,968,797	-				-0.5
1,968,797	-				-0.1
1,968,798	+				+0.4
1,968,799	-				-0.7
1,968,805	-				+0.7
1,968,805	-				-1.3
1,968,847	+				-0.1
1,968,879	+				-1.8
1,969,192	+				+0.4
1,969,347	-		BPHYT_RS08640	0.11	-1.5
1,969,719	-		BPHYT_RS08640	0.43	-0.6
1,969,798	+		BPHYT_RS08640	0.50	-1.8
1,969,798	+		BPHYT_RS08640	0.50	-0.2
1,970,253	-		BPHYT_RS08640	0.89	+0.2
1,970,354	+				-0.7
1,970,355	-				-0.3
1,970,355	-				+0.4
1,970,906	+		BPHYT_RS08645	0.56	-1.2
1,971,255	-				-0.2