Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04900

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
1,126,017	-		BPHYT_RS04895	0.20	+0.5
1,126,252	+		BPHYT_RS04895	0.62	-0.1
1,126,361	+		BPHYT_RS04895	0.82	+0.5
1,126,361	+		BPHYT_RS04895	0.82	+1.8
1,126,361	+		BPHYT_RS04895	0.82	-1.2
1,126,436	-				+0.2
1,126,473	-				-1.2
1,126,732	+				+0.0
1,126,738	+				+0.1
1,126,738	+				-1.0
1,126,784	+				-2.4
1,126,785	-				-1.8
1,126,785	-				-0.1
1,126,941	-		BPHYT_RS04900	0.13	-0.1
1,127,049	+		BPHYT_RS04900	0.20	-0.9
1,127,058	+		BPHYT_RS04900	0.21	+0.2
1,127,058	+		BPHYT_RS04900	0.21	+0.5
1,127,058	+		BPHYT_RS04900	0.21	-0.7
1,127,094	+		BPHYT_RS04900	0.23	-1.0
1,127,094	+		BPHYT_RS04900	0.23	-0.3
1,127,115	+		BPHYT_RS04900	0.25	-0.1
1,127,586	+		BPHYT_RS04900	0.57	-0.0
1,127,600	+		BPHYT_RS04900	0.58	-0.2
1,128,039	+		BPHYT_RS04900	0.88	-0.8
1,128,301	-				-0.7
1,128,303	-				+1.2
1,128,303	-				-0.9
1,128,401	+				+0.1
1,128,402	-				+0.0
1,128,402	-				-0.5
1,128,431	-		BPHYT_RS04905	0.15	-0.6
1,128,524	-		BPHYT_RS04905	0.38	-0.8
1,128,524	-		BPHYT_RS04905	0.38	-0.5
1,128,896	-				+1.3
1,128,996	-				-0.6
1,129,012	-				-0.0
1,129,012	-				+0.3
1,129,067	-		BPHYT_RS04910	0.18	-0.9