Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04885

Experiment: 36hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO1 MOI 1
1,122,922	+				+0.4
1,122,922	+				+0.7
1,122,922	+				-0.4
1,122,923	-				-0.3
1,122,923	-				+0.4
1,122,928	-				+1.7
1,122,928	-				+0.2
1,123,316	+		BPHYT_RS04880	0.42	-0.8
1,123,379	+		BPHYT_RS04880	0.49	-0.2
1,123,688	+		BPHYT_RS04880	0.83	+0.1
1,123,688	+		BPHYT_RS04880	0.83	-0.1
1,123,688	+		BPHYT_RS04880	0.83	-0.7
1,123,689	-		BPHYT_RS04880	0.83	-0.7
1,123,865	-				-0.3
1,123,865	-				-0.2
1,124,620	+		BPHYT_RS04885	0.68	+0.2
1,124,624	+		BPHYT_RS04885	0.68	-1.2
1,124,831	+		BPHYT_RS04885	0.88	+0.5
1,125,038	-				+0.8
1,125,268	-		BPHYT_RS04890	0.32	-0.0
1,125,268	-		BPHYT_RS04890	0.32	-2.2