Experiment: 36hr Phyto Lib Only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS05695 and BPHYT_RS05700 overlap by 11 nucleotides BPHYT_RS05700 and BPHYT_RS05705 overlap by 11 nucleotides BPHYT_RS05705 and BPHYT_RS05710 overlap by 4 nucleotides BPHYT_RS05710 and BPHYT_RS05715 are separated by 217 nucleotides
BPHYT_RS05695: BPHYT_RS05695 - transcriptional regulator, at 1,299,247 to 1,300,137
_RS05695
BPHYT_RS05700: BPHYT_RS05700 - hypothetical protein, at 1,300,127 to 1,300,441
_RS05700
BPHYT_RS05705: BPHYT_RS05705 - hypothetical protein, at 1,300,431 to 1,300,676
_RS05705
BPHYT_RS05710: BPHYT_RS05710 - hypothetical protein, at 1,300,673 to 1,301,020
_RS05710
BPHYT_RS05715: BPHYT_RS05715 - hypothetical protein, at 1,301,238 to 1,301,435
_RS05715
Position (kb) 1300
1301 Strain fitness (log2 ratio) -1
0
1 at 1299.866 kb on + strand, within BPHYT_RS05695 at 1299.867 kb on - strand, within BPHYT_RS05695 at 1299.872 kb on + strand, within BPHYT_RS05695 at 1299.902 kb on - strand, within BPHYT_RS05695 at 1299.932 kb on + strand, within BPHYT_RS05695 at 1300.194 kb on + strand, within BPHYT_RS05700 at 1300.195 kb on - strand, within BPHYT_RS05700 at 1300.360 kb on + strand, within BPHYT_RS05700 at 1300.360 kb on + strand, within BPHYT_RS05700 at 1300.623 kb on - strand, within BPHYT_RS05705 at 1300.732 kb on + strand, within BPHYT_RS05710 at 1300.851 kb on + strand, within BPHYT_RS05710 at 1300.852 kb on - strand, within BPHYT_RS05710 at 1300.852 kb on - strand, within BPHYT_RS05710 at 1300.852 kb on - strand, within BPHYT_RS05710 at 1300.862 kb on + strand, within BPHYT_RS05710 at 1300.896 kb on + strand, within BPHYT_RS05710 at 1300.896 kb on + strand, within BPHYT_RS05710 at 1300.985 kb on - strand, within BPHYT_RS05710 at 1301.498 kb on + strand at 1301.498 kb on + strand at 1301.638 kb on - strand at 1301.642 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 36hr Phyto Lib Only remove 1,299,866 + BPHYT_RS05695 0.69 -0.1 1,299,867 - BPHYT_RS05695 0.70 +0.8 1,299,872 + BPHYT_RS05695 0.70 -0.2 1,299,902 - BPHYT_RS05695 0.74 +0.6 1,299,932 + BPHYT_RS05695 0.77 +0.9 1,300,194 + BPHYT_RS05700 0.21 -1.0 1,300,195 - BPHYT_RS05700 0.22 +0.4 1,300,360 + BPHYT_RS05700 0.74 +1.0 1,300,360 + BPHYT_RS05700 0.74 -0.1 1,300,623 - BPHYT_RS05705 0.78 +0.7 1,300,732 + BPHYT_RS05710 0.17 +0.3 1,300,851 + BPHYT_RS05710 0.51 +0.3 1,300,852 - BPHYT_RS05710 0.51 -0.9 1,300,852 - BPHYT_RS05710 0.51 +0.8 1,300,852 - BPHYT_RS05710 0.51 -0.1 1,300,862 + BPHYT_RS05710 0.54 +0.1 1,300,896 + BPHYT_RS05710 0.64 +0.9 1,300,896 + BPHYT_RS05710 0.64 -0.1 1,300,985 - BPHYT_RS05710 0.90 -0.6 1,301,498 + +0.5 1,301,498 + -0.1 1,301,638 - -0.5 1,301,642 - -0.5
Or see this region's nucleotide sequence