Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32340

Experiment: 24hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO6 MOI 1
2,827,105	+				-0.1
2,827,544	-		BPHYT_RS32335	0.21	+1.0
2,827,580	-		BPHYT_RS32335	0.29	-0.2
2,828,037	+				+0.0
2,828,109	+		BPHYT_RS32340	0.23	-1.1
2,828,110	-		BPHYT_RS32340	0.23	+0.1
2,828,237	-		BPHYT_RS32340	0.55	-1.4
2,828,351	-		BPHYT_RS32340	0.83	-1.0
2,828,479	+				+0.2
2,828,480	-				+0.1
2,828,480	-				+0.6
2,828,567	-		BPHYT_RS32345	0.22	-0.3
2,828,576	-		BPHYT_RS32345	0.23	-0.3
2,828,576	-		BPHYT_RS32345	0.23	+0.5
2,828,661	+		BPHYT_RS32345	0.36	-0.4
2,828,887	-		BPHYT_RS32345	0.69	+0.3
2,829,102	-				-0.3
2,829,288	-				-0.0
2,829,328	+				-1.5