Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29780

Experiment: 24hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO6 MOI 1
2,235,205	-				-0.5
2,235,207	+				+0.4
2,235,252	-				+0.3
2,235,284	-				+0.2
2,235,621	+		BPHYT_RS29775	0.76	+1.0
2,235,680	+				-1.6
2,235,681	-				-0.2
2,235,750	+				-1.1
2,236,005	+		BPHYT_RS29780	0.44	+0.9
2,236,104	+		BPHYT_RS29780	0.60	-2.8
2,236,105	-		BPHYT_RS29780	0.60	+0.1
2,236,105	-		BPHYT_RS29780	0.60	+0.3
2,236,140	+		BPHYT_RS29780	0.65	+0.3
2,236,140	+		BPHYT_RS29780	0.65	-2.0
2,236,141	-		BPHYT_RS29780	0.66	-0.8
2,236,282	-		BPHYT_RS29780	0.88	+0.1
2,236,287	+		BPHYT_RS29780	0.88	+0.2
2,236,288	-		BPHYT_RS29780	0.89	+0.4
2,236,397	-				-0.4
2,236,397	-				-0.4
2,236,433	-				+0.7
2,236,459	+				+2.4
2,236,475	-				-0.2
2,236,475	-				+0.7
2,236,484	+				-0.4
2,236,485	-				+0.4
2,236,568	+				-0.4
2,236,635	-				-1.0
2,237,035	+				-0.8
2,237,226	+		BPHYT_RS29790	0.22	+0.4
2,237,229	-		BPHYT_RS29790	0.22	-1.0
2,237,353	+		BPHYT_RS29790	0.42	-0.4