Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS23545
Experiment: 24hr PHYTO6 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO6 MOI 1 |
|---|---|---|---|---|---|
| remove | |||||
| 849,351 | - | -0.0 | |||
| 849,756 | - | BPHYT_RS23545 | 0.16 | -0.5 | |
| 849,812 | + | BPHYT_RS23545 | 0.17 | -2.2 | |
| 850,251 | - | BPHYT_RS23545 | 0.31 | -0.4 | |
| 851,009 | + | BPHYT_RS23545 | 0.53 | -0.3 | |
| 851,426 | + | BPHYT_RS23545 | 0.66 | +0.3 | |
| 851,879 | + | BPHYT_RS23545 | 0.80 | +0.3 | |
| 851,879 | + | BPHYT_RS23545 | 0.80 | +0.7 | |
| 852,306 | - | +0.1 | |||
| 852,474 | - | -0.4 | |||
| 852,647 | - | -0.2 | |||
| 853,040 | - | BPHYT_RS23550 | 0.16 | -0.0 | |
| 853,040 | - | BPHYT_RS23550 | 0.16 | -0.3 | |
| 853,099 | + | BPHYT_RS23550 | 0.17 | -0.0 |
Or see this region's nucleotide sequence