Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15800

Experiment: 24hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO6 MOI 1
3,585,738	+		BPHYT_RS15795	0.40	-0.4
3,585,738	+		BPHYT_RS15795	0.40	-0.7
3,585,912	+		BPHYT_RS15795	0.60	-0.2
3,585,913	-		BPHYT_RS15795	0.61	+1.5
3,585,913	-		BPHYT_RS15795	0.61	-1.6
3,585,913	-		BPHYT_RS15795	0.61	-1.5
3,585,996	+		BPHYT_RS15795	0.70	-0.7
3,585,997	-		BPHYT_RS15795	0.70	-0.3
3,586,052	+		BPHYT_RS15795	0.77	+0.2
3,586,078	-		BPHYT_RS15795	0.80	+0.0
3,586,404	+				-2.4
3,586,405	-				+1.7
3,586,502	+				+0.2
3,586,503	-				-0.0
3,586,504	+				-0.1
3,586,504	+				-0.3
3,586,505	-				-1.5
3,586,702	+		BPHYT_RS15800	0.35	+0.2
3,586,832	+		BPHYT_RS15800	0.53	+0.3
3,586,890	-		BPHYT_RS15800	0.61	+2.9
3,586,961	-		BPHYT_RS15800	0.70	-0.3
3,586,966	+		BPHYT_RS15800	0.71	+0.7
3,586,966	+		BPHYT_RS15800	0.71	+2.2
3,586,967	-		BPHYT_RS15800	0.71	+1.8
3,587,138	-				+3.2
3,587,138	-				+0.1
3,587,138	-				-0.8
3,587,156	-				+0.8
3,587,182	+				-0.1
3,587,182	+				-1.4
3,587,230	+				-0.9
3,587,230	+				+0.0
3,587,231	-				+0.2
3,587,287	+				-0.8
3,587,287	+				-0.3
3,587,370	-				+0.7
3,587,370	-				+0.1
3,587,531	-		BPHYT_RS15805	0.18	-0.2
3,587,739	+		BPHYT_RS15805	0.33	-0.5
3,587,739	+		BPHYT_RS15805	0.33	-0.1
3,587,739	+		BPHYT_RS15805	0.33	-1.2
3,587,740	-		BPHYT_RS15805	0.33	-0.1
3,587,740	-		BPHYT_RS15805	0.33	-1.0
3,587,740	-		BPHYT_RS15805	0.33	+0.1
3,587,740	-		BPHYT_RS15805	0.33	-2.2
3,587,825	+		BPHYT_RS15805	0.39	+1.8
3,587,826	-		BPHYT_RS15805	0.40	+0.2