Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14685

Experiment: 24hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO6 MOI 1
3,344,460	-				+0.5
3,344,460	-				+0.7
3,344,461	+				+0.1
3,344,461	+				-1.1
3,344,507	+				-2.1
3,344,508	-				-0.0
3,344,669	-		BPHYT_RS14680	0.27	-0.3
3,344,708	-		BPHYT_RS14680	0.32	+0.7
3,344,713	+		BPHYT_RS14680	0.33	+0.3
3,344,714	-		BPHYT_RS14680	0.33	+1.9
3,344,714	-		BPHYT_RS14680	0.33	+0.2
3,345,401	+		BPHYT_RS14685	0.24	-0.8
3,345,722	-		BPHYT_RS14685	0.63	-2.7
3,345,919	+		BPHYT_RS14685	0.87	-0.3
3,345,920	-		BPHYT_RS14685	0.87	-1.9
3,345,993	+				-0.6
3,346,065	+				-0.1
3,346,065	+				-0.7
3,346,066	-				-1.1
3,346,066	-				+1.1
3,346,263	+				-0.2
3,346,263	+				-0.8
3,346,263	+				+0.1
3,346,511	-		BPHYT_RS14690	0.27	+0.5
3,346,699	+		BPHYT_RS14690	0.40	+0.4
3,346,699	+		BPHYT_RS14690	0.40	+0.2
3,346,699	+		BPHYT_RS14690	0.40	+0.3
3,346,700	-		BPHYT_RS14690	0.40	-1.2
3,346,700	-		BPHYT_RS14690	0.40	-0.6
3,346,703	-		BPHYT_RS14690	0.40	-1.3
3,346,703	-		BPHYT_RS14690	0.40	-1.1
3,346,861	+		BPHYT_RS14690	0.51	-1.1
3,346,862	-		BPHYT_RS14690	0.51	+0.9
3,346,862	-		BPHYT_RS14690	0.51	+0.0
3,346,862	-				-0.5
3,346,862	-		BPHYT_RS14690	0.51	+0.9
3,346,862	-		BPHYT_RS14690	0.51	+0.0
3,346,868	-		BPHYT_RS14690	0.51	-1.0
3,346,876	-		BPHYT_RS14690	0.52	-0.4
3,346,972	+		BPHYT_RS14690	0.59	-0.7
3,346,972	+		BPHYT_RS14690	0.59	+0.1
3,346,972	+		BPHYT_RS14690	0.59	-2.3
3,346,972	+		BPHYT_RS14690	0.59	+0.8
3,346,973	-		BPHYT_RS14690	0.59	+0.5
3,346,973	-		BPHYT_RS14690	0.59	-0.4
3,346,973	-		BPHYT_RS14690	0.59	+0.1
3,346,973	-		BPHYT_RS14690	0.59	-0.3
3,346,975	+		BPHYT_RS14690	0.59	-0.1