Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13530

Experiment: 24hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO6 MOI 1
3,085,948	+				-2.6
3,085,948	+				+0.2
3,086,793	+				-2.7
3,086,794	-				-0.0
3,087,790	-				-0.3
3,087,991	+				+1.6
3,087,992	-				+0.5
3,088,121	+		BPHYT_RS13540	0.10	-0.3
3,088,122	-		BPHYT_RS13540	0.10	+1.4
3,088,123	+		BPHYT_RS13540	0.10	-1.0
3,088,124	-		BPHYT_RS13540	0.10	-0.5
3,088,124	-		BPHYT_RS13540	0.10	-0.1
3,088,124	-		BPHYT_RS13540	0.10	+0.8
3,088,124	-		BPHYT_RS13540	0.10	-1.8
3,088,124	-		BPHYT_RS13540	0.10	-1.0
3,088,132	+		BPHYT_RS13540	0.11	-0.5
3,088,132	+		BPHYT_RS13540	0.11	+0.7
3,088,133	-		BPHYT_RS13540	0.11	+0.4
3,088,133	-		BPHYT_RS13540	0.11	+0.9
3,088,133	-		BPHYT_RS13540	0.11	-0.2
3,088,133	-		BPHYT_RS13540	0.11	-1.3
3,088,133	-		BPHYT_RS13540	0.11	-0.4
3,088,133	-		BPHYT_RS13540	0.11	+0.7
3,088,133	-		BPHYT_RS13540	0.11	+1.1
3,088,133	-		BPHYT_RS13540	0.11	+0.3
3,088,216	+		BPHYT_RS13540	0.21	+0.9
3,088,217	-		BPHYT_RS13540	0.21	-1.1
3,088,217	-		BPHYT_RS13540	0.21	-0.9
3,088,217	-		BPHYT_RS13540	0.21	-0.2
3,088,331	-		BPHYT_RS13540	0.33	-0.2
3,088,454	-		BPHYT_RS13540	0.47	-0.7
3,088,745	-		BPHYT_RS13540	0.79	-0.9