Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13525
Experiment: 24hr PHYTO6 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO6 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,084,889 | - | BPHYT_RS13520 | 0.31 | -1.2 | |
3,084,890 | + | BPHYT_RS13520 | 0.31 | +0.4 | |
3,085,034 | + | BPHYT_RS13520 | 0.41 | -0.6 | |
3,085,035 | - | BPHYT_RS13520 | 0.41 | +0.2 | |
3,085,097 | + | BPHYT_RS13520 | 0.45 | -1.4 | |
3,085,268 | + | BPHYT_RS13520 | 0.57 | -0.9 | |
3,085,464 | - | BPHYT_RS13520 | 0.71 | +0.6 | |
3,085,763 | + | +0.8 | |||
3,085,764 | - | -0.7 | |||
3,085,948 | + | -2.6 | |||
3,085,948 | + | +0.2 | |||
3,086,793 | + | -2.7 | |||
3,086,794 | - | -0.0 |
Or see this region's nucleotide sequence