Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08720

Experiment: 24hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO6 MOI 1
1,978,801	-		BPHYT_RS08710	0.82	+0.7
1,978,947	+				+0.9
1,978,948	-				-0.8
1,979,422	-		BPHYT_RS08715	0.63	-0.8
1,979,457	-		BPHYT_RS08715	0.69	+0.6
1,980,020	-		BPHYT_RS08720	0.39	-1.3
1,980,239	+		BPHYT_RS08720	0.74	+0.4
1,980,239	+		BPHYT_RS08720	0.74	+0.2
1,980,239	+		BPHYT_RS08720	0.74	+0.3
1,980,240	-		BPHYT_RS08720	0.74	+0.2
1,980,240	-		BPHYT_RS08720	0.74	-2.1
1,980,240	-		BPHYT_RS08720	0.74	+0.3
1,980,366	-				+1.4
1,980,769	-				+1.6
1,980,819	-				-2.0
1,980,855	-				-2.1
1,980,855	-				-1.6
1,980,855	-				-0.4
1,981,034	+		BPHYT_RS08730	0.57	+0.2
1,981,035	-		BPHYT_RS08730	0.57	-0.3
1,981,035	-		BPHYT_RS08730	0.57	-1.3
1,981,035	-		BPHYT_RS08730	0.57	-1.5
1,981,208	-				-0.6